SRX100316
GSM722390: Gata1 G1ERbmp r1 100914 4

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata1

Cell type

Cell type Class
Blood
Cell type
G1E
Tissue
Blood
Lineage
cellLine
Description
Gata1- erythroid progenitor

Attributes by original data submitter

Sample

source_name
Gata1 ChIP-Seq in mouse G1ER treated with BIO
cell type
Erthyroid Progenitor (G1ER)
chip antibody
Gata1
antibody catalog number
Santa Cruz SC-265

Sequenced DNA Library

library_name
GSM722390: Gata1_G1ERbmp_r1_100914_4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
24988334
Reads aligned (%)
87.6
Duplicates removed (%)
5.3
Number of peaks
7486 (qval < 1E-05)

mm9

Number of total reads
24988334
Reads aligned (%)
87.5
Duplicates removed (%)
5.4
Number of peaks
7379 (qval < 1E-05)

Base call quality data from DBCLS SRA